Pf AmpliSeq Peru of P. falciparum - SRA

SRX23579442: Pf AmpliSeq Peru of P. falciparum
1 ILLUMINA (Illumina MiSeq) run: 294,333 spots, 99M bases, 66.6Mb downloads

Design: Custom Amplicon Pf AmpliSeq Peru

Submitted by: Universidad Peruana Cayetano Heredia

Study: Pf AmpliSeq Remote Peru

PRJNA1074830 • SRP488996 • All experiments • All runs

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Here, we apply a modified highly-multiplexed deep sequencing assay: Pf AmpliSeq Peru. The tool targets a newly developed 28-SNP Peru barcode for parasite population analysis within Peru, 11 putative drug resistance genes and pfhrp2/3 genes. It was applied to 90 samples from remote and indigenous communities in the Peruvian Amazon (2016-2020), generating baseline surveillance data.

Sample:

SAMN39892842 • SRS20424596 • All experiments • All runs

Organism: Plasmodium falciparum

Library:

Name: 10_S26

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 294,333 spots, 99M bases, 66.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR27921324	294,333	99M	66.6Mb	2024-02-08

ID:: 31848743

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